STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HS6ST3Heparan sulfate 6-O-sulfotransferase 3. (472 aa)    
Predicted Functional Partners:
GLCE
Glucuronic acid epimerase.
    
 
 0.733
SDC1
Syndecan 1.
     
 0.641
GPC3
Glypican 3.
     
 0.617
GPC6
Glypican 6.
     
 0.598
GPC4
Glypican 4.
     
 0.598
GPC2
Glypican 2.
     
 0.598
GPC1
Glypican 1.
     
 0.598
WDR64
WD repeat domain 64.
      
 0.583
FAM162B
Family with sequence similarity 162 member B.
      
 0.568
ZPLD1
Zona pellucida like domain containing 1.
      
 0.568
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.