Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C11orf1Chromosome 11 open reading frame 1. (208 aa)    
Predicted Functional Partners:
FAM183A
Family with sequence similarity 183 member A.
    
 
 0.966
C5orf49
Chromosome 5 open reading frame 49.
   
 
 0.963
CFAP126
Cilia and flagella associated protein 126.
    
 
 0.950
TEX43
Testis expressed 43.
   
   0.916
CFAP45
Cilia and flagella associated protein 45.
    
   0.909
EFHB
EF-hand domain family member B.
   
   0.908
C7orf31
Chromosome 7 open reading frame 31.
   
   0.899
ENSCWAP00000006092
annotation not available
    
   0.899
CCDC173
Coiled-coil domain containing 173.
   
   0.895
C9orf135
Chromosome 9 open reading frame 135.
   
   0.895
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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