STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000004591annotation not available (95 aa)    
Predicted Functional Partners:
ENSCWAP00000004776
annotation not available
   
 0.986
ENSCWAP00000005264
annotation not available
   
 0.983
SDHAF2
Succinate dehydrogenase complex assembly factor 2.
   
 
 0.888
TAC1
Tachykinin precursor 1.
   
 0.875
SDHC
Succinate dehydrogenase complex subunit C.
   
 
 0.725
ENSCWAP00000004319
annotation not available
     
 0.705
SDHAF1
Succinate dehydrogenase complex assembly factor 1.
     
 0.699
PPP1R32
Protein phosphatase 1 regulatory subunit 32.
   
 
 0.681
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
   
 
 0.665
LEMD3
LEM domain containing 3.
    
   0.631
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.