STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC4Leucine rich repeat containing 4. (652 aa)    
Predicted Functional Partners:
NTNG2
Netrin G2.
    
 0.996
NTNG1
Netrin G1.
    
 0.923
ADGRL2
Adhesion G protein-coupled receptor L2.
    
   0.823
ADGRL1
Adhesion G protein-coupled receptor L1.
    
   0.823
ADGRL3
Adhesion G protein-coupled receptor L3.
    
   0.823
PTPRS
Protein tyrosine phosphatase receptor type S.
    
 0.717
PTPRF
Protein tyrosine phosphatase receptor type F.
    
 0.687
RBM28
RNA binding motif protein 28.
      
 0.684
IMPDH1
Inosine monophosphate dehydrogenase 1.
      
 0.673
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.673
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.