Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC4Leucine rich repeat containing 4. (652 aa)    
Predicted Functional Partners:
NTNG2
Netrin G2.
   
 0.995
NTNG1
Netrin G1.
    
 0.966
PTPRS
Protein tyrosine phosphatase receptor type S.
    
 0.798
ERBB2
Erb-b2 receptor tyrosine kinase 2.
   
 0.765
ERBB3
Erb-b2 receptor tyrosine kinase 3.
   
 0.765
ERBB4
Erb-b2 receptor tyrosine kinase 4.
   
 0.765
EGFR
Epidermal growth factor receptor.
   
 0.765
PTPRF
Protein tyrosine phosphatase receptor type F.
    
 0.733
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.727
DLG4
Discs large MAGUK scaffold protein 4.
   
 0.703
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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