STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APLP1Amyloid beta precursor like protein 1. (647 aa)    
Predicted Functional Partners:
APBB1
Amyloid beta precursor protein binding family B member 1.
    
 0.911
CNTN5
Contactin 5.
   
 
 0.875
BACE1
Beta-secretase 1.
    
 0.865
APBB2
Amyloid beta precursor protein binding family B member 2.
    
 0.861
SORL1
Sortilin related receptor 1.
    
 0.858
BACE2
Beta-secretase 2.
    
 0.841
NCSTN
Nicastrin.
    
 
 0.836
HMMR
Hyaluronan mediated motility receptor.
    
 0.782
APBB3
Amyloid beta precursor protein binding family B member 3.
    
 0.782
ENSCWAP00000005003
annotation not available
   
   0.770
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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