STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAM19ADAM metallopeptidase domain 19. (909 aa)    
Predicted Functional Partners:
SH3PXD2A
SH3 and PX domains 2A.
    
 0.717
LGI1
Leucine rich glioma inactivated 1.
    
 0.626
SH3PXD2B
SH3 and PX domains 2B.
    
 0.602
LGI4
Leucine rich repeat LGI family member 4.
     
 0.596
CDH1
Cadherin 1.
    
 0.566
DLG3
Discs large MAGUK scaffold protein 3.
    
  0.532
DLG4
Discs large MAGUK scaffold protein 4.
    
  0.532
DLG2
Discs large MAGUK scaffold protein 2.
    
  0.532
DLG1
Discs large MAGUK scaffold protein 1.
    
  0.532
NOXO1
NADPH oxidase organizer 1.
    
 0.530
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.