STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FRA10AC1FRA10A associated CGG repeat 1. (314 aa)    
Predicted Functional Partners:
CWC27
CWC27 spliceosome associated cyclophilin.
   
 
 0.958
CHERP
Calcium homeostasis endoplasmic reticulum protein.
    
 
 0.950
ESS2
Ess-2 splicing factor homolog.
    
 
 0.949
IK
IK cytokine.
   
   0.947
SF3B2
Splicing factor 3b subunit 2.
    
 
 0.946
LENG1
Leukocyte receptor cluster member 1.
    
   0.933
THOC1
THO complex 1.
    
 
 0.834
PRPF3
pre-mRNA processing factor 3.
    
 
 0.832
PITHD1
PITH domain containing 1.
      
 0.821
ZNF830
Zinc finger protein 830.
    
 
 0.819
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.