STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEST4Bestrophin 4. (468 aa)    
Predicted Functional Partners:
RPE65
Retinoid isomerohydrolase RPE65.
      
 0.837
OTOP2
Otopetrin 2.
   
  
 0.643
CA7
Carbonic anhydrase 7.
   
  
 0.620
DEPDC1
DEP domain containing 1.
      
 0.598
TTR
Transthyretin.
      
 0.586
GLUL
Glutamate-ammonia ligase.
    
 
 0.576
RLBP1
Retinaldehyde binding protein 1.
      
 0.492
MERTK
MER proto-oncogene, tyrosine kinase.
      
 0.488
GUCA2B
Guanylate cyclase activator 2B.
      
 0.458
C11orf86
Chromosome 11 open reading frame 86.
      
 0.444
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.