close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM28RNA binding motif protein 28. (760 aa)    
Predicted Functional Partners:
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.995
RRP12
Ribosomal RNA processing 12 homolog.
   
 
 0.992
RBM34
RNA binding motif protein 34.
   
 0.992
PUM3
Pumilio RNA binding family member 3.
   
 
 0.992
DDX27
DEAD-box helicase 27.
   
 
 0.990
CEBPZ
CCAAT enhancer binding protein zeta.
   
 
 0.990
DDX24
DEAD-box helicase 24.
   
 
 0.990
DDX18
DEAD-box helicase 18.
   
 
 0.989
GTPBP4
GTP binding protein 4.
   
 
 0.988
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.985
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (24%) [HD]