Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SV2CSynaptic vesicle glycoprotein 2C. (724 aa)    
Predicted Functional Partners:
LAMC2
Laminin subunit gamma 2.
     
 0.922
LAMA4
Laminin subunit alpha 4.
     
 0.905
LAMA2
Laminin subunit alpha 2.
     
 0.896
LAMC1
Laminin subunit gamma 1.
     
 0.894
SV2A
Synaptic vesicle glycoprotein 2A.
     
  0.890
SV2B
Synaptic vesicle glycoprotein 2B.
     
  0.890
LAMC3
Laminin subunit gamma 3.
     
 0.889
LAMA3
Laminin subunit alpha 3.
     
 0.884
LAMB1
Laminin subunit beta 1.
     
 0.881
LAMB2
Laminin subunit beta 2.
     
 0.881
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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