STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR76WD repeat domain 76. (632 aa)    
Predicted Functional Partners:
HELLS
Helicase, lymphoid specific.
   
 0.989
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.977
PARP1
poly(ADP-ribose) polymerase 1.
    
 0.974
DDB1
Damage specific DNA binding protein 1.
    
 0.967
XRCC5
X-ray repair cross complementing 5.
    
 
 0.935
XRCC6
X-ray repair cross complementing 6.
    
 
 0.932
CCT2
Chaperonin containing TCP1 subunit 2.
    
   0.927
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
 0.920
ATAD2
ATPase family AAA domain containing 2.
   
 
 0.913
PCNA
Proliferating cell nuclear antigen.
   
 0.907
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.