Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNTN1Contactin 1. (1018 aa)    
Predicted Functional Partners:
NFASC
Neurofascin.
   
 0.992
NRCAM
Neuronal cell adhesion molecule.
   
 0.977
CHL1
Cell adhesion molecule L1 like.
   
 0.972
L1CAM
L1 cell adhesion molecule.
   
 0.954
MCAM
Melanoma cell adhesion molecule.
    
  0.949
PTPRZ1
Protein tyrosine phosphatase receptor type Z1.
   
 
 0.943
CNTNAP2
Contactin associated protein like 2.
   
 0.928
CNTNAP1
Contactin associated protein 1.
   
 0.928
CNTNAP5
Contactin associated protein like 5.
   
 0.928
ENSCWAP00000003733
annotation not available
   
 0.910
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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