STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDCD6Programmed cell death 6. (189 aa)    
Predicted Functional Partners:
SEC31A
SEC31 homolog A, COPII coat complex component.
    
 0.959
KLHL12
Kelch like family member 12.
    
 0.957
ENSCWAP00000026923
annotation not available
    
 
 0.936
SEC31B
SEC31 homolog B, COPII coat complex component.
    
 0.905
ANXA11
Annexin A11.
    
 
 0.872
SEC23IP
SEC23 interacting protein.
    
 
 0.867
TSG101
Tumor susceptibility 101.
   
 
 0.865
HEBP2
Heme binding protein 2.
    
   0.862
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.819
DDHD2
DDHD domain containing 2.
    
 
 0.771
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.