STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEZ6Seizure related 6 homolog. (992 aa)    
Predicted Functional Partners:
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
    
 0.758
SDF2
Stromal cell derived factor 2.
    
 
 0.757
AP2M1
Adaptor related protein complex 2 subunit mu 1.
    
  0.749
XAF1
XIAP associated factor 1.
    
 
 0.694
PHF12
PHD finger protein 12.
    
 
 0.677
KARS1
lysyl-tRNA synthetase 1.
    
 
 0.670
MPP7
Membrane palmitoylated protein 7.
    
 
 0.668
WSCD1
WSC domain containing 1.
    
 
 0.667
SRR
Serine racemase.
    
 
 0.662
S100A8
S100 calcium binding protein A8.
   
 0.660
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.