STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRMD7FERM domain containing 7. (714 aa)    
Predicted Functional Partners:
GPR143
G protein-coupled receptor 143.
      
 0.754
RAP2C
RAP2C, member of RAS oncogene family.
     
 0.722
CRYBB3
Crystallin beta B3.
     
 0.700
ITSN2
Intersectin 2.
     
 0.636
VCAN
Versican.
      
 0.636
ABCA4
ATP binding cassette subfamily A member 4.
      
 0.632
HPS5
HPS5 biogenesis of lysosomal organelles complex 2 subunit 2.
      
 0.631
PLXNA3
Plexin A3.
     
 0.622
GGCX
Gamma-glutamyl carboxylase.
      
 0.596
RAP1A
RAP1A, member of RAS oncogene family.
     
 0.593
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.