Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CC2D1BCoiled-coil and C2 domain containing 1B. (861 aa)    
Predicted Functional Partners:
ENSCWAP00000008358
annotation not available
    
 0.905
ENSCWAP00000011115
annotation not available
    
 0.905
CHMP4C
Charged multivesicular body protein 4C.
    
 0.905
CCDC27
Coiled-coil domain containing 27.
    
   0.862
ENSCWAP00000020224
annotation not available
    
 0.820
CHMP6
Charged multivesicular body protein 6.
     
 0.801
CHMP7
Charged multivesicular body protein 7.
     
 0.760
CHMP2A
Charged multivesicular body protein 2A.
     
 0.756
ENSCWAP00000007316
annotation not available
     
 0.755
IST1
IST1 factor associated with ESCRT-III.
     
 0.754
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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