STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERAC1Serine active site containing 1. (654 aa)    
Predicted Functional Partners:
TMEM242
Transmembrane protein 242.
      
 0.810
TULP4
TUB like protein 4.
      
 0.792
SCAF8
SR-related CTD associated factor 8.
      
 0.781
NARS2
asparaginyl-tRNA synthetase 2, mitochondrial.
      
 0.754
ENSCWAP00000004616
annotation not available
      
 0.754
TFB1M
Transcription factor B1, mitochondrial.
   
  
 0.670
SNX9
Sorting nexin 9.
      
 0.645
ENSCWAP00000027310
annotation not available
      
 0.632
LRPPRC
Leucine rich pentatricopeptide repeat containing.
      
 0.593
RAPGEFL1
Rap guanine nucleotide exchange factor like 1.
      
 0.588
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.