STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TGFB1Transforming growth factor beta 1. (390 aa)    
Predicted Functional Partners:
TGFBR1
Transforming growth factor beta receptor 1.
    
 0.998
TGFBR2
Transforming growth factor beta receptor 2.
    
 0.998
LTBP1
Latent transforming growth factor beta binding protein 1.
    
 0.997
LRRC32
Leucine rich repeat containing 32.
    
 0.996
DCN
Decorin.
    
 0.995
LTBP3
Latent transforming growth factor beta binding protein 3.
    
 0.990
NRROS
Negative regulator of reactive oxygen species.
    
 0.988
TGFB2
Transforming growth factor beta 2.
    
 0.984
ACVR1B
Activin A receptor type 1B.
    
 0.984
ACVRL1
Activin A receptor like type 1.
    
 0.983
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.