STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRI1KRI1 homolog. (700 aa)    
Predicted Functional Partners:
KRR1
KRR1 small subunit processome component homolog.
   
 
 0.996
UTP23
UTP23 small subunit processome component.
   
 
 0.990
NOP14
NOP14 nucleolar protein.
   
 0.989
POP1
POP1 homolog, ribonuclease P/MRP subunit.
   
  0.976
RPP30
Ribonuclease P/MRP subunit p30.
   
  0.973
POP4
POP4 homolog, ribonuclease P/MRP subunit.
   
  0.972
POP5
POP5 homolog, ribonuclease P/MRP subunit.
   
 0.971
RPP14
Ribonuclease P/MRP subunit p14.
    
  0.965
WDR36
WD repeat domain 36.
   
  0.963
MPHOSPH10
M-phase phosphoprotein 10.
   
  0.962
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.