STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ROMO1Reactive oxygen species modulator 1. (79 aa)    
Predicted Functional Partners:
NDUFB1
NADH:ubiquinone oxidoreductase subunit B1.
   
    0.975
TIMM21
Translocase of inner mitochondrial membrane 21.
    
 0.962
TIMM17B
Translocase of inner mitochondrial membrane 17B.
   
 0.956
ENSCWAP00000029038
annotation not available
    
 0.953
TIMM17A
Translocase of inner mitochondrial membrane 17A.
   
 0.952
ENSCWAP00000021640
annotation not available
   
  
 0.893
UQCR10
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
  
 0.883
YJEFN3
YjeF N-terminal domain containing 3.
   
  
 0.878
COX5B
Cytochrome c oxidase subunit 5B.
   
 
 0.865
ENSCWAP00000001554
annotation not available
   
 
 0.864
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.