Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FARP1FERM, ARH/RhoGEF and pleckstrin domain protein 1. (1033 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
     
 0.835
SDC1
Syndecan 1.
    
 
 0.797
RAP1A
RAP1A, member of RAS oncogene family.
     
 0.742
ENSCWAP00000005082
annotation not available
     
 0.742
ENSCWAP00000027499
annotation not available
     
 0.742
ENSCWAP00000017988
annotation not available
   
  
 0.683
RHOF
Ras homolog family member F, filopodia associated.
     
 0.680
PIP5K1C
Phosphatidylinositol-4-phosphate 5-kinase type 1 gamma.
     
 0.673
ALCAM
Activated leukocyte cell adhesion molecule.
     
 0.671
PLXNA4
Plexin A4.
     
 0.650
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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