STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000004769annotation not available (109 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.629
TRIM28
Tripartite motif containing 28.
    
 0.550
GART
annotation not available
     
  0.503
ATM
ATM serine/threonine kinase.
    
 0.500
SUFU
SUFU negative regulator of hedgehog signaling.
    
 0.485
ENSCWAP00000025850
annotation not available
  
     0.477
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.433
ENSCWAP00000016040
annotation not available
    
 
 0.430
ENSCWAP00000005444
annotation not available
  
     0.429
SPOPL
Speckle type BTB/POZ protein like.
   
  0.429
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.