STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000004770annotation not available (550 aa)    
Predicted Functional Partners:
COP1
COP1 E3 ubiquitin ligase.
    
 0.996
DDB1
Damage specific DNA binding protein 1.
    
 0.982
RBX1
Ring-box 1.
    
 0.959
DDB2
Damage specific DNA binding protein 2.
     
 0.959
DDA1
DET1 and DDB1 associated 1.
    
 0.954
CUL4B
Cullin 4B.
    
 0.943
CUL4A
Cullin 4A.
    
 0.935
ETV1
ETS variant transcription factor 1.
    
 
 0.929
ETV5
ETS variant transcription factor 5.
    
 
 0.927
TRIB1
Tribbles pseudokinase 1.
    
 
 0.925
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.