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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000004772annotation not available (173 aa)    
Predicted Functional Partners:
XRCC3
X-ray repair cross complementing 3.
    
 0.872
ATG9B
Autophagy related 9B.
    
   0.806
ENSCWAP00000024998
annotation not available
    
   0.806
ENSCWAP00000026962
annotation not available
      
 0.692
CACNA2D2
Calcium voltage-gated channel auxiliary subunit alpha2delta 2.
      
 0.659
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1.
      
 0.640
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
      
 0.629
CCDC84
Coiled-coil domain containing 84.
      
 0.620
RBM42
RNA binding motif protein 42.
      
 0.615
ENSCWAP00000023743
annotation not available
      
 0.605
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.