STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP8B1ATPase phospholipid transporting 8B1. (1251 aa)    
Predicted Functional Partners:
TMEM30A
Transmembrane protein 30A.
   
 0.978
ENSCWAP00000018595
annotation not available
   
 0.973
TMEM30B
Transmembrane protein 30B.
   
 0.968
ATP10B
ATPase phospholipid transporting 10B (putative).
     
0.903
ATP11B
ATPase phospholipid transporting 11B (putative).
  
  
0.897
ENSCWAP00000026200
annotation not available
     
0.894
ATP8B4
ATPase phospholipid transporting 8B4 (putative).
  
  
 
0.884
ATP8A1
ATPase phospholipid transporting 8A1.
  
  
 
0.883
ENSCWAP00000024951
annotation not available
  
  
 
0.856
ATP11A
ATPase phospholipid transporting 11A.
  
  
0.831
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.