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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCMF1Potassium channel modulatory factor 1. (357 aa)    
Predicted Functional Partners:
UBR4
Ubiquitin protein ligase E3 component n-recognin 4.
    
 
 0.976
PPM1A
Protein phosphatase, Mg2+/Mn2+ dependent 1A.
   
    0.781
CUL3
Cullin 3.
   
  
 0.673
PTPRS
Protein tyrosine phosphatase receptor type S.
      
 0.625
ENSCWAP00000027383
annotation not available
      
 0.617
ZNF574
Zinc finger protein 574.
    
 
 0.609
MANBAL
Mannosidase beta like.
      
 0.600
NDE1
nudE neurodevelopment protein 1.
      
 0.585
SLC17A3
Solute carrier family 17 member 3.
      
 0.581
SLC12A3
Solute carrier family 12 member 3.
    
 
 0.578
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.