Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KCMF1Potassium channel modulatory factor 1. (357 aa)    
Predicted Functional Partners:
UBR4
Ubiquitin protein ligase E3 component n-recognin 4.
    
 
 0.973
ABHD10
Abhydrolase domain containing 10.
    
   0.945
VEGFD
Vascular endothelial growth factor D.
    
   0.916
ENSCWAP00000022770
annotation not available
    
   0.898
ENSCWAP00000022341
annotation not available
    
   0.857
ANKRD9
Ankyrin repeat domain 9.
    
 
 0.833
ENSCWAP00000016787
annotation not available
    
   0.803
ENSCWAP00000016809
annotation not available
    
   0.803
NIPSNAP3A
Nipsnap homolog 3A.
    
   0.803
UBE2A
Ubiquitin conjugating enzyme E2 A.
    
 
 0.791
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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