STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTPRKProtein tyrosine phosphatase receptor type K. (1471 aa)    
Predicted Functional Partners:
PTPRU
Protein tyrosine phosphatase receptor type U.
   
   0.931
FRAS1
Fraser extracellular matrix complex subunit 1.
   
 
 0.896
ENSCWAP00000020132
annotation not available
      
 0.887
CTNNB1
Catenin beta 1.
    
 0.884
CTNND1
Catenin delta 1.
    
 0.767
ARVCF
ARVCF delta catenin family member.
    
 0.767
EGFR
Epidermal growth factor receptor.
   
 0.753
JUP
Junction plakoglobin.
    
 0.716
PTPRA
Protein tyrosine phosphatase receptor type A.
    
 0.672
INSR
Insulin receptor.
    
 0.657
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.