Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ISG20Interferon stimulated exonuclease gene 20. (175 aa)    
Predicted Functional Partners:
RBM28
RNA binding motif protein 28.
   
 
 0.809
CEBPZ
CCAAT enhancer binding protein zeta.
   
 
 0.785
IFIH1
Interferon induced with helicase C domain 1.
   
  
 0.779
IFI35
Interferon induced protein 35.
   
 0.777
AAMP
Angio associated migratory cell protein.
   
   0.769
PCNA
Proliferating cell nuclear antigen.
   
 0.761
PAN3
poly(A) specific ribonuclease subunit PAN3.
    
 0.754
WDR18
WD repeat domain 18.
   
  0.750
RPL8
Ribosomal protein L8.
   
  0.744
DDX24
DEAD-box helicase 24.
   
 0.731
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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