STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCBP1poly(rC) binding protein 1. (356 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.985
ENSCWAP00000007523
annotation not available
   
 0.947
PCBP3
poly(rC) binding protein 3.
   
   0.929
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.923
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.910
ENSCWAP00000013422
annotation not available
   
 
 0.884
RBMX
RNA binding motif protein X-linked.
   
 0.880
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.867
PRPF8
pre-mRNA processing factor 8.
   
   0.864
ENSCWAP00000007410
annotation not available
   
 0.863
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.