Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000004831annotation not available (108 aa)    
Predicted Functional Partners:
XRCC6
X-ray repair cross complementing 6.
    
   0.921
HMGA1
High mobility group AT-hook 1.
   
 0.905
PARP1
poly(ADP-ribose) polymerase 1.
    
 
 0.875
RB1
RB transcriptional corepressor 1.
    
 0.836
NPM1
Nucleophosmin 1.
    
   0.824
CHAF1A
Chromatin assembly factor 1 subunit A.
    
   0.742
IGF2BP2
Insulin like growth factor 2 mRNA binding protein 2.
   
 
 0.664
PARP2
poly(ADP-ribose) polymerase 2.
    
   0.645
SUOX
Sulfite oxidase.
      
 0.587
TP53
Tumor protein p53.
    
 0.580
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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