STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2orf42Chromosome 2 open reading frame 42. (574 aa)    
Predicted Functional Partners:
RSBN1L
Round spermatid basic protein 1 like.
      
 0.712
MIA3
MIA SH3 domain ER export factor 3.
      
 0.624
MYBBP1A
MYB binding protein 1a.
      
 0.622
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
      
 0.588
POLR3H
RNA polymerase III subunit H.
      
 0.583
SMAP2
Small ArfGAP2.
      
 0.583
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
      
 0.573
GNA13
G protein subunit alpha 13.
      
 0.548
RSBN1
Round spermatid basic protein 1.
      
 0.533
PITPNA
Phosphatidylinositol transfer protein alpha.
      
 0.529
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.