Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CASS4Cas scaffold protein family member 4. (786 aa)    
Predicted Functional Partners:
PTK2B
Protein tyrosine kinase 2 beta.
    
 0.929
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.894
PTK2
Protein tyrosine kinase 2.
    
 0.852
CRK
CRK proto-oncogene, adaptor protein.
    
 0.840
CRKL
CRK like proto-oncogene, adaptor protein.
    
 0.840
NME8
NME/NM23 family member 8.
   
 
 0.832
LPXN
Leupaxin.
    
 0.814
TGFB1I1
Transforming growth factor beta 1 induced transcript 1.
    
 0.814
PXN
Paxillin.
    
 0.814
CD2AP
CD2 associated protein.
    
 
 0.795
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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