STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPCAMEpithelial cell adhesion molecule. (314 aa)    
Predicted Functional Partners:
CLDN7
Claudin 7.
   
 
 0.857
KRT8
Keratin 8.
   
  
 0.781
FLOT1
Flotillin 1.
    
 
 0.779
SPINT2
Serine peptidase inhibitor, Kunitz type 2.
   
  
 0.709
MSH2
mutS homolog 2.
      
 0.700
NOG
Noggin.
      
 0.692
KRT19
Keratin 19.
   
  
 0.673
ENSCWAP00000025714
annotation not available
   
  
 0.669
MSH6
mutS homolog 6.
      
 0.658
CD44
CD44 molecule (Indian blood group).
      
 0.654
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.