STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRR14Proline rich 14. (586 aa)    
Predicted Functional Partners:
CBX5
Chromobox 5.
    
 
 0.964
CBX1
Chromobox 1.
    
 
 0.922
PPP2R5D
Protein phosphatase 2 regulatory subunit B'delta.
    
 
 0.873
NIPBL
NIPBL cohesin loading factor.
    
 
 0.869
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
    
   0.858
PPP2CB
Protein phosphatase 2 catalytic subunit beta.
    
   0.858
PPP2R1B
Protein phosphatase 2 scaffold subunit Abeta.
    
   0.847
PPP2R1A
Protein phosphatase 2 scaffold subunit Aalpha.
    
   0.847
PPP2R5C
Protein phosphatase 2 regulatory subunit B'gamma.
    
 
 0.824
LRIF1
Ligand dependent nuclear receptor interacting factor 1.
    
 
 0.820
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.