STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYNJ2Synaptojanin 2. (1467 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 
 0.964
SH3KBP1
SH3 domain containing kinase binding protein 1.
    
 
 0.959
SACM1L
SAC1 like phosphatidylinositide phosphatase.
    
 0.944
SYNJ1
Synaptojanin 1.
     
 0.939
ITSN1
Intersectin 1.
    
 
 0.923
SNX9
Sorting nexin 9.
   
 
 0.921
INPP4A
Inositol polyphosphate-4-phosphatase type I A.
     
 0.914
PI4KB
Phosphatidylinositol 4-kinase beta.
    
 0.912
PIP5K1A
Phosphatidylinositol-4-phosphate 5-kinase type 1 alpha.
    
 0.911
PIP5K1C
Phosphatidylinositol-4-phosphate 5-kinase type 1 gamma.
    
 0.911
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.