Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TPPPTubulin polymerization promoting protein. (221 aa)    
Predicted Functional Partners:
SNCA
Synuclein alpha.
    
 
 0.964
HDAC6
Histone deacetylase 6.
    
 
 0.833
SNCG
Synuclein gamma.
    
 
 0.783
GPNMB
Glycoprotein nmb.
      
 0.613
ENSCWAP00000007864
annotation not available
    
 
 0.596
DUSP13
Dual specificity phosphatase 13.
      
 0.590
DCX
Doublecortin.
      
 0.588
OAZ3
Ornithine decarboxylase antizyme 3.
      
 0.569
ENSCWAP00000011589
annotation not available
      
 0.568
TOMM34
Translocase of outer mitochondrial membrane 34.
      
 0.564
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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