STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF13BTNF receptor superfamily member 13B. (248 aa)    
Predicted Functional Partners:
TNFSF13B
TNF superfamily member 13b.
    
 0.998
CAMLG
Calcium modulating ligand.
    
 
 0.969
ENSCWAP00000005083
TNFSF12-TNFSF13 readthrough.
    
 0.961
TRAF5
TNF receptor associated factor 5.
    
 
 0.837
TNFRSF17
TNF receptor superfamily member 17.
   
  
 0.833
TRAF6
TNF receptor associated factor 6.
    
 
 0.831
TRAF1
TNF receptor associated factor 1.
    
 
 0.812
TRAF2
TNF receptor associated factor 2.
    
 
 0.812
TNFRSF13C
TNF receptor superfamily member 13C.
   
  
 0.793
ZNF579
Zinc finger protein 579.
    
   0.782
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.