STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXA1Forkhead box A1. (469 aa)    
Predicted Functional Partners:
GATA3
GATA binding protein 3.
    
 0.993
AR
Androgen receptor.
   
 0.983
ESR1
Estrogen receptor 1.
    
 0.980
NRIP1
Nuclear receptor interacting protein 1.
     
 0.915
GATA6
GATA binding protein 6.
    
 0.889
EP300
E1A binding protein p300.
     
 0.887
NKX2-1
NK2 homeobox 1.
  
 
 
 0.880
GATA4
GATA binding protein 4.
    
 0.859
BUD23
BUD23 rRNA methyltransferase and ribosome maturation factor.
    
  0.848
GATA2
GATA binding protein 2.
    
 0.843
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.