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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VWA7Von Willebrand factor A domain containing 7. (891 aa)    
Predicted Functional Partners:
PRDM4
PR/SET domain 4.
   
 0.768
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
      
 0.672
SF3B4
Splicing factor 3b subunit 4.
      
 0.648
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
      
 0.624
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
      
 0.605
PRPF31
pre-mRNA processing factor 31.
      
 0.575
PRPF6
pre-mRNA processing factor 6.
      
 0.570
PRPF4
pre-mRNA processing factor 4.
      
 0.566
VOPP1
VOPP1 WW domain binding protein.
      
 0.564
PSTPIP2
Proline-serine-threonine phosphatase interacting protein 2.
      
 0.550
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.