Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VWA7Von Willebrand factor A domain containing 7. (891 aa)    
Predicted Functional Partners:
VARS1
valyl-tRNA synthetase 1.
      
 0.830
GPANK1
G-patch domain and ankyrin repeats 1.
      
 0.665
PPP1R18
Protein phosphatase 1 regulatory subunit 18.
      
 0.662
NOC4L
Nucleolar complex associated 4 homolog.
      
 0.658
DPY19L4
Dpy-19 like 4.
      
 0.656
SLC45A1
Solute carrier family 45 member 1.
      
 0.643
HABP4
Hyaluronan binding protein 4.
      
 0.643
PRDM4
PR/SET domain 4.
   
 
 0.640
TMEM9B
TMEM9 domain family member B.
      
 0.637
SLC35C1
Solute carrier family 35 member C1.
      
 0.635
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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