STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB3BRAB3B, member RAS oncogene family. (219 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.986
SYTL4
Synaptotagmin like 4.
   
 0.888
RIMS1
Regulating synaptic membrane exocytosis 1.
    
 0.848
PCLO
Piccolo presynaptic cytomatrix protein.
     
 0.831
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.819
RABIF
RAB interacting factor.
    
 
 0.818
ENSCWAP00000018079
annotation not available
   
 
 0.790
RIMS3
Regulating synaptic membrane exocytosis 3.
    
 0.785
CHML
CHM like Rab escort protein.
    
 0.765
CHM
CHM Rab escort protein.
    
 0.765
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.