STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM71F1Family with sequence similarity 71 member F1. (356 aa)    
Predicted Functional Partners:
RAB2B
RAB2B, member RAS oncogene family.
    
 
 0.766
RAB2A
RAB2A, member RAS oncogene family.
    
 
 0.766
TNN
Tenascin N.
    
  0.730
TNR
Tenascin R.
    
  0.730
TNC
Tenascin C.
    
  0.730
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
    
 0.565
HCST
Hematopoietic cell signal transducer.
    
  0.558
ADAMTS4
ADAM metallopeptidase with thrombospondin type 1 motif 4.
    
 0.557
TMCO2
Transmembrane and coiled-coil domains 2.
  
   
 0.548
HAPLN1
Hyaluronan and proteoglycan link protein 1.
    
  0.522
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.