Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC52Leucine rich repeat containing 52. (315 aa)    
Predicted Functional Partners:
DIPK1B
Divergent protein kinase domain 1B.
    
   0.811
POGK
Pogo transposable element derived with KRAB domain.
      
 0.803
MGST3
Microsomal glutathione S-transferase 3.
 
    
 0.790
UCK2
Uridine-cytidine kinase 2.
    
 0.753
KCNMA1
Potassium calcium-activated channel subfamily M alpha 1.
     
 0.704
KCNMB1
Potassium calcium-activated channel subfamily M regulatory beta subunit 1.
     
 0.698
TMCO1
Transmembrane and coiled-coil domains 1.
      
 0.689
KCNU1
Potassium calcium-activated channel subfamily U member 1.
     
 0.678
LRRC26
Leucine rich repeat containing 26.
      
 0.669
UCK1
Uridine-cytidine kinase 1.
    
 0.589
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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