STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF220Ring finger protein 220. (566 aa)    
Predicted Functional Partners:
ZC4H2
Zinc finger C4H2-type containing.
    
 
 0.984
USP7
Ubiquitin specific peptidase 7.
    
 
 0.812
CCDC24
Coiled-coil domain containing 24.
      
 0.811
HIBCH
3-hydroxyisobutyryl-CoA hydrolase.
    
   0.779
SIN3A
SIN3 transcription regulator family member A.
    
 
 0.671
SIN3B
SIN3 transcription regulator family member B.
    
 
 0.671
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.657
CUL7
Cullin 7.
    
 
 0.643
VRK1
VRK serine/threonine kinase 1.
    
 0.627
ERI3
ERI1 exoribonuclease family member 3.
      
 0.618
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.