Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CALUCalumenin. (315 aa)    
Predicted Functional Partners:
P4HB
Prolyl 4-hydroxylase subunit beta.
   
 
 0.862
AURKA
Aurora kinase A.
    
   0.854
ZWINT
ZW10 interacting kinetochore protein.
    
   0.854
FAM20C
FAM20C golgi associated secretory pathway kinase.
    
 0.817
CALR
Calreticulin.
   
 
 0.814
ENSCWAP00000006118
annotation not available
   
 
 0.810
HSP90B1
Heat shock protein 90 beta family member 1.
   
 
 0.782
HSPA5
Heat shock protein family A (Hsp70) member 5.
   
 
 0.768
ENSCWAP00000001437
annotation not available
    
   0.764
NUCB1
Nucleobindin 1.
   
 
 0.703
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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