STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC15A4Solute carrier family 15 member 4. (566 aa)    
Predicted Functional Partners:
CXorf21
Chromosome X open reading frame 21.
    
 0.980
CHMP6
Charged multivesicular body protein 6.
    
   0.746
IRF5
Interferon regulatory factor 5.
   
 0.708
NADK
NAD kinase.
     
  0.646
SLC37A3
Solute carrier family 37 member 3.
    
 
 0.596
SLC7A4
Solute carrier family 7 member 4.
    
 
 0.584
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
     
  0.577
NUDT12
Nudix hydrolase 12.
    
  0.571
TNFRSF21
TNF receptor superfamily member 21.
      
 0.559
PPIL4
Peptidylprolyl isomerase like 4.
      
 0.556
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.