STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000004958annotation not available (491 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
 0.713
ARID4B
AT-rich interaction domain 4B.
    
 0.553
SUFU
SUFU negative regulator of hedgehog signaling.
   
  0.520
ENSCWAP00000017590
annotation not available
      
 0.503
ENSCWAP00000009050
annotation not available
    
  0.491
ENSCWAP00000009118
annotation not available
    
  0.491
GTF3C3
General transcription factor IIIC subunit 3.
   
 0.487
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.479
MRPS11
Mitochondrial ribosomal protein S11.
    
  0.476
MRPS10
Mitochondrial ribosomal protein S10.
   
  0.476
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.