STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SETD3SET domain containing 3, actin histidine methyltransferase. (595 aa)    
Predicted Functional Partners:
BCCIP
BRCA2 and CDKN1A interacting protein.
   
 
 0.850
RPL23
Ribosomal protein L23.
    
   0.776
NSD3
Nuclear receptor binding SET domain protein 3.
     
 0.776
RAB40B
RAB40B, member RAS oncogene family.
   
    0.775
SUCLG2
succinate-CoA ligase GDP-forming beta subunit.
   
 0.766
SMYD2
SET and MYND domain containing 2.
     
 0.747
POLR2B
RNA polymerase II subunit B.
   
 
 0.741
MINDY2
MINDY lysine 48 deubiquitinase 2.
    
 0.725
MINDY1
MINDY lysine 48 deubiquitinase 1.
    
 0.725
MMAA
Metabolism of cobalamin associated A.
    
 0.725
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.