Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM11Transmembrane protein 11. (268 aa)    
Predicted Functional Partners:
BNIP3
BCL2 interacting protein 3.
    
 
 0.949
BNIP3L
BCL2 interacting protein 3 like.
    
 
 0.917
DNAJC11
DnaJ heat shock protein family (Hsp40) member C11.
     
 0.810
APOOL
Apolipoprotein O like.
    
 0.746
MTX2
Metaxin 2.
   
 
 0.743
MICOS13
Mitochondrial contact site and cristae organizing system subunit 13.
     
 0.692
MRPL58
Mitochondrial ribosomal protein L58.
   
  
 0.669
SAMM50
SAMM50 sorting and assembly machinery component.
     
 0.664
CHCHD3
Coiled-coil-helix-coiled-coil-helix domain containing 3.
     
 0.661
LETM1
Leucine zipper and EF-hand containing transmembrane protein 1.
      
 0.644
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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