Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TIA1TIA1 cytotoxic granule associated RNA binding protein. (386 aa)    
Predicted Functional Partners:
TIAL1
TIA1 cytotoxic granule associated RNA binding protein like 1.
   
 
 0.971
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.953
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.888
DCP1A
Decapping mRNA 1A.
   
 
 0.888
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.880
MAPT
Microtubule associated protein tau.
    
 
 0.873
ATXN2
Ataxin 2.
   
 
 0.868
CAPRIN1
Cell cycle associated protein 1.
   
 
 0.850
EWSR1
EWS RNA binding protein 1.
   
 0.830
EIF4E
Eukaryotic translation initiation factor 4E.
    
 
 0.825
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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