STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSH2mutS homolog 2. (934 aa)    
Predicted Functional Partners:
MSH6
mutS homolog 6.
  
0.999
MSH3
mutS homolog 3.
  
0.999
MLH1
mutL homolog 1.
 
 0.999
PMS2
PMS1 homolog 2, mismatch repair system component.
 
 0.998
PMS1
PMS1 homolog 1, mismatch repair system component.
 
 0.997
EXO1
Exonuclease 1.
   
 0.994
PCNA
Proliferating cell nuclear antigen.
   
 0.991
TP53
Tumor protein p53.
    
 0.986
BRCA1
BRCA1 DNA repair associated.
   
 
 0.984
MCM9
Minichromosome maintenance 9 homologous recombination repair factor.
   
 
 0.976
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.